STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FecIECF subfamily RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family. (306 aa)    
Predicted Functional Partners:
YjlD_2
NADH dehydrogenase, FAD-containing subunit.
     
 0.811
RMCT_1551
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
     
 0.811
RMCT_1552
ECF subfamily RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family.
 
    
0.789
YybR
HxlR family transcriptional regulator.
  
    0.699
RMCT_1346
Alkylhydroperoxidase AhpD core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
  
 0.684
IdeR_1
Transcriptional repressor sirR.
  
  
 0.680
CysL
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
  
 0.643
RMCT_2330
Anti-sigma factor.
  
 
 0.608
RMCT_2837
RNA polymerase sigma-70 factor.
  
 
 0.583
MsrR_3
Transcriptional regulator.
  
  
 0.568
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.