STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1551FAD-dependent pyridine nucleotide-disulfide oxidoreductase. (428 aa)    
Predicted Functional Partners:
FecI
ECF subfamily RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family.
     
 0.811
RMCT_1552
ECF subfamily RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family.
     
 0.810
YjlD_2
NADH dehydrogenase, FAD-containing subunit.
 
    
0.784
GdhA
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.583
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
   
 
 0.539
RMCT_4559
Stage II sporulation protein E.
  
  
 0.517
Kgd
Alpha-ketoglutarate decarboxylase.
  
  
 0.490
MrpA
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit.
  
  
 0.483
NuoL
NADH dehydrogenase subunit L.
  
  
 0.477
PetC1
glycine/D-amino acid oxidase, deaminating.
  
  
 0.464
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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