STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1556Glycosyl transferase family protein. (516 aa)    
Predicted Functional Partners:
rsmI
Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.777
RMCT_3847
Transmembrane protein.
  
     0.703
RMCT_1762
Protein of unknown function.
  
     0.682
RMCT_3919
Transmembrane protein.
  
     0.682
RMCT_1557
Putative uncharacterized protein.
       0.678
RMCT_0803
DNA polymerase III subunit delta.
  
     0.661
RMCT_3430
Hypothetical protein.
  
     0.651
RMCT_2598
Transmembrane protein.
 
     0.644
RMCT_0672
Protein of unknown function.
  
     0.642
RMCT_1819
Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands.
 
     0.617
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.