STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1575Flp pilus assembly protein CpaB. (215 aa)    
Predicted Functional Partners:
RMCT_0131
Alanine rich membrane protein.
 
  
 0.792
RMCT_4559
Stage II sporulation protein E.
  
  
 0.790
RMCT_0133
Membrane protein.
 
  
 0.789
RMCT_0130
Type II secretion system protein F.
 
  
 0.787
RMCT_1574
FmdB family regulatory protein.
  
  
 0.778
RMCT_0117
Helicase/secretion CpaE-like protein.
 
    0.719
mscL
Large-conductance ion mechanosensitive channel mscL; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
       0.631
RMCT_3554
Amino acid-binding ACT domain-containing protein.
 
     0.612
RMCT_1573
5,10-methenyltetrahydrofolate synthetase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.538
RMCT_0033
Hypothetical protein.
  
     0.536
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.