STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1595acetyl-CoA acetyltransferase. (392 aa)    
Predicted Functional Partners:
RMCT_1596
Putative uncharacterized protein.
 
 0.966
FadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 0.923
RMCT_3980
Putative uncharacterized protein.
  
 
 0.921
RMCT_1639
Putative uncharacterized protein.
 
 
 0.893
RMCT_2372
Putative uncharacterized protein.
 
 
 0.889
RMCT_3370
Acyl dehydratase.
 
 
 0.886
RMCT_1599
enoyl-CoA hydratase/carnithine racemase.
  
 0.884
RMCT_2396
Putative uncharacterized protein.
 
 
 0.879
RMCT_4628
Acyl dehydratase.
 
 
 0.877
RMCT_4526
Acyl dehydratase.
 
 
 0.870
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.