STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1610Putative uncharacterized protein. (159 aa)    
Predicted Functional Partners:
RMCT_1608
Acyl dehydratase.
 
     0.907
RMCT_2623
Acyl dehydratase; Belongs to the UPF0336 family.
  
 
 0.803
RMCT_2954
(3R)-hydroxyacyl-ACP dehydratase subunit HadC; Belongs to the UPF0336 family.
  
 
 0.803
RMCT_2956
(3R)-hydroxyacyl-ACP dehydratase subunit HadA; Belongs to the UPF0336 family.
  
 
 0.803
GabD_1
NAD-dependent aldehyde dehydrogenase.
  
  
 0.763
RMCT_0989
acetyl-CoA acetyltransferase.
 
 
 0.752
KatA
Catalase.
   
 0.739
KatE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.739
Oxc
Thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
 
 
 0.726
RMCT_1721
acyl-CoA dehydrogenase.
 
  0.723
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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