Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BioI_4 | EryA_1 | RMCT_1617 | RMCT_0775 | Cytochrome P450. | Acyl transferase domain-containing protein. | 0.709 |
BioI_4 | Frc_21 | RMCT_1617 | RMCT_1615 | Cytochrome P450. | L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. | 0.784 |
BioI_4 | LgrD_2 | RMCT_1617 | RMCT_4555 | Cytochrome P450. | Linear gramicidin synthetase subunit D. | 0.698 |
BioI_4 | OphA1_1 | RMCT_1617 | RMCT_0397 | Cytochrome P450. | Ferredoxin. | 0.709 |
BioI_4 | OphA1_2 | RMCT_1617 | RMCT_0856 | Cytochrome P450. | Phthalate 4,5-dioxygenase reductase subunit. | 0.746 |
BioI_4 | Pks2 | RMCT_1617 | RMCT_4379 | Cytochrome P450. | Polyketide synthase pks5. | 0.726 |
BioI_4 | PpsA_2 | RMCT_1617 | RMCT_0416 | Cytochrome P450. | Beta-ketoacyl synthase. | 0.794 |
BioI_4 | PpsA_7 | RMCT_1617 | RMCT_4669 | Cytochrome P450. | Polyketide synthase pks13. | 0.903 |
BioI_4 | RMCT_1616 | RMCT_1617 | RMCT_1616 | Cytochrome P450. | Lactoylglutathione lyase-like lyase. | 0.800 |
BioI_4 | RecQ_1 | RMCT_1617 | RMCT_2525 | Cytochrome P450. | ATP-dependent DNA helicase. | 0.717 |
EryA_1 | BioI_4 | RMCT_0775 | RMCT_1617 | Acyl transferase domain-containing protein. | Cytochrome P450. | 0.709 |
EryA_1 | LgrD_2 | RMCT_0775 | RMCT_4555 | Acyl transferase domain-containing protein. | Linear gramicidin synthetase subunit D. | 0.997 |
EryA_1 | OphA1_1 | RMCT_0775 | RMCT_0397 | Acyl transferase domain-containing protein. | Ferredoxin. | 0.672 |
EryA_1 | OphA1_2 | RMCT_0775 | RMCT_0856 | Acyl transferase domain-containing protein. | Phthalate 4,5-dioxygenase reductase subunit. | 0.672 |
EryA_1 | Pks2 | RMCT_0775 | RMCT_4379 | Acyl transferase domain-containing protein. | Polyketide synthase pks5. | 0.984 |
EryA_1 | PpsA_2 | RMCT_0775 | RMCT_0416 | Acyl transferase domain-containing protein. | Beta-ketoacyl synthase. | 0.992 |
EryA_1 | PpsA_7 | RMCT_0775 | RMCT_4669 | Acyl transferase domain-containing protein. | Polyketide synthase pks13. | 0.971 |
EryA_1 | RMCT_1616 | RMCT_0775 | RMCT_1616 | Acyl transferase domain-containing protein. | Lactoylglutathione lyase-like lyase. | 0.405 |
EryA_1 | RecQ_1 | RMCT_0775 | RMCT_2525 | Acyl transferase domain-containing protein. | ATP-dependent DNA helicase. | 0.785 |
Frc_21 | BioI_4 | RMCT_1615 | RMCT_1617 | L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. | Cytochrome P450. | 0.784 |
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