STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1624Gluconolactonase. (307 aa)    
Predicted Functional Partners:
FabG_14
Glucose 1-dehydrogenase.
  
 
 0.916
GntK
Gluconate kinase, SKI family.
    
 0.914
PamO_4
Cyclododecanone monooxygenase.
  
 
  0.912
RMCT_1625
Putative uncharacterized protein.
       0.878
RMCT_1626
Dehydrogenase.
  
  
 0.811
RMCT_4248
Gluconolactonase.
  
     0.648
Dan_1
Amidohydrolase 3.
 
     0.643
Dan_2
D-amino acid aminohydrolase.
 
     0.641
RMCT_1627
Putative aminoglycoside phosphotransferase.
       0.586
RMCT_4197
Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase.
 
  
 0.532
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.