STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1631acyl-CoA dehydrogenase. (400 aa)    
Predicted Functional Partners:
MenB_3
enoyl-CoA hydratase/carnithine racemase.
  
 0.929
CaiD_8
enoyl-CoA hydratase/carnithine racemase.
  
 0.855
RMCT_2501
acyl-CoA dehydrogenase FadE34.
     0.775
RMCT_1322
acyl-CoA dehydrogenase.
     0.774
RMCT_1603
acyl-CoA dehydrogenase.
     0.772
RMCT_4639
acyl-CoA dehydrogenase protein.
 
     0.772
RMCT_4190
acyl-CoA dehydrogenase protein.
 
     0.768
RMCT_2481
isovaleryl-CoA dehydrogenase.
     0.767
RMCT_2892
acyl-CoA dehydrogenase fadE32.
  
 0.766
RMCT_1620
acyl-CoA dehydrogenase.
 
     0.764
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.