STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EchA8_28enoyl-CoA hydratase/carnithine racemase. (284 aa)    
Predicted Functional Partners:
RMCT_1640
acetyl-CoA acetyltransferase.
  
  0.891
AcoB
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit.
  
 
 0.849
RMCT_1636
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component.
  
 
 0.839
RMCT_1634
Oxidoreductase.
  
  
 0.829
RMCT_1648
acyl-CoA dehydrogenase.
  
  0.774
KasA_2
Fatty acid synthase.
  
 0.750
RMCT_0339
acetyl-CoA acetyltransferase.
 
  0.739
RMCT_0852
Lipid-transfer protein.
  
  0.739
RMCT_0894
propanoyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.739
RMCT_0957
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.739
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.