STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LuxA_5F420-dependent methylene-tetrahydromethanopterin reductase. (357 aa)    
Predicted Functional Partners:
RMCT_1638
Putative uncharacterized protein.
       0.818
RMCT_1639
Putative uncharacterized protein.
 
     0.813
MenE_4
acyl-CoA synthetase.
     
 0.798
RMCT_1640
acetyl-CoA acetyltransferase.
       0.784
RMCT_1337
Luciferase-like protein.
  
     0.662
Fgd1_5
Putative uncharacterized protein.
  
     0.658
RMCT_1634
Oxidoreductase.
       0.618
AcoB
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit.
       0.616
EchA8_28
enoyl-CoA hydratase/carnithine racemase.
       0.606
RMCT_1636
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component.
       0.598
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.