| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PcrA_1 | PcrA_2 | RMCT_2352 | RMCT_2353 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | 0.994 |
| PcrA_1 | PcrA_3 | RMCT_2352 | RMCT_2357 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase II uvrD2. | 0.958 |
| PcrA_1 | PcrA_4 | RMCT_2352 | RMCT_1676 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase II uvrD1. | 0.743 |
| PcrA_1 | RecQ_1 | RMCT_2352 | RMCT_2525 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase. | 0.975 |
| PcrA_1 | dnaN | RMCT_2352 | RMCT_1113 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.749 |
| PcrA_1 | recA | RMCT_2352 | RMCT_0719 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.717 |
| PcrA_1 | uvrA | RMCT_2352 | RMCT_4479 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.426 |
| PcrA_1 | uvrC | RMCT_2352 | RMCT_3635 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.700 |
| PcrA_2 | PcrA_1 | RMCT_2353 | RMCT_2352 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | 0.994 |
| PcrA_2 | PcrA_3 | RMCT_2353 | RMCT_2357 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase II uvrD2. | 0.987 |
| PcrA_2 | PcrA_4 | RMCT_2353 | RMCT_1676 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase II uvrD1. | 0.947 |
| PcrA_2 | RecQ_1 | RMCT_2353 | RMCT_2525 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase. | 0.975 |
| PcrA_2 | dnaN | RMCT_2353 | RMCT_1113 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.758 |
| PcrA_2 | recA | RMCT_2353 | RMCT_0719 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.717 |
| PcrA_2 | uvrA | RMCT_2353 | RMCT_4479 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.426 |
| PcrA_2 | uvrC | RMCT_2353 | RMCT_3635 | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.745 |
| PcrA_3 | PcrA_1 | RMCT_2357 | RMCT_2352 | ATP-dependent DNA helicase II uvrD2. | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | 0.958 |
| PcrA_3 | PcrA_2 | RMCT_2357 | RMCT_2353 | ATP-dependent DNA helicase II uvrD2. | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | 0.987 |
| PcrA_3 | PcrA_4 | RMCT_2357 | RMCT_1676 | ATP-dependent DNA helicase II uvrD2. | ATP-dependent DNA helicase II uvrD1. | 0.961 |
| PcrA_3 | RecQ_1 | RMCT_2357 | RMCT_2525 | ATP-dependent DNA helicase II uvrD2. | ATP-dependent DNA helicase. | 0.990 |