Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GabD_2Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (483 aa)    
Predicted Functional Partners:
SdhA_2
Succinate dehydrogenase flavoprotein subunit.
  
 0.933
SdhA_1
Succinate dehydrogenase flavoprotein subunit.
  
 0.933
Kgd
Alpha-ketoglutarate decarboxylase.
  
 0.930
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.927
HpcH
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.921
SdhB
Succinate dehydrogenase iron-sulfur subunit.
  
 
 0.919
RMCT_0639
Succinate dehydrogenase.
  
 
 0.919
GltA2
Type II citrate synthase; Belongs to the citrate synthase family.
  
 0.919
CitA
Citrate synthase 2; Belongs to the citrate synthase family.
  
 0.919
FrdB
Fumarate reductase iron-sulfur subunit.
  
 
 0.919
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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