STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RutA_6Oxidoreductase. (311 aa)    
Predicted Functional Partners:
RMCT_1930
Coenzyme F420-dependent oxidoreductase.
 
     0.651
RMCT_1692
Putative uncharacterized protein.
       0.581
RMCT_1690
Integral membrane protein.
       0.573
RutA_2
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase.
  
   
 0.566
SsuA
Putative uncharacterized protein.
 
  
 0.558
Ddn_1
Deazaflavin-dependent nitroreductase family protein.
 
   
 0.538
Fgd_1
Oxidoreductase.
  
   
 0.531
RMCT_1886
Nuclear transport factor 2.
 
     0.530
SsuD_1
Alkanesulfonate monooxygenase.
  
     0.513
SsuC
Transporter.
 
  
 0.512
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.