Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RMCT_1704Dihydrodipicolinate reductase. (366 aa)    
Predicted Functional Partners:
HdhA_1
Short chain dehydrogenase.
 
    0.902
RMCT_1705
Putative uncharacterized protein.
       0.782
BaiE_1
Hypothetical protein.
 
     0.610
RMCT_1884
Hypothetical protein.
 
     0.586
RMCT_1874
Hypothetical protein.
 
     0.574
RMCT_1702
LuxR family transcriptional regulator.
       0.557
RMCT_4461
Nucleic acid-binding protein.
 
     0.543
RMCT_1875
Gamma-carboxymuconolactone decarboxylase subunit like protein.
 
     0.520
RMCT_1949
MaoC-like dehydratase.
 
     0.504
KstR_1
TetR family transcriptional regulator.
 
     0.479
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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