STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1735Polyketide cyclase / dehydrase and lipid transport. (146 aa)    
Predicted Functional Partners:
CtpF_2
Metal cation transporter P-type ATPase ctpE.
 
   
 0.752
RMCT_1736
Putative uncharacterized protein.
     
 0.748
EstB_4
Penicillin-binding protein, beta-lactamase class C.
       0.734
RMCT_0704
Peptidoglycan-binding LysM.
 
     0.639
RMCT_2656
acyl-ACP thioesterase.
  
     0.600
EchA6
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.595
RMCT_2613
Transmembrane protein.
  
     0.590
RMCT_3336
LpqE protein.
  
     0.590
RMCT_4431
Hypothetical protein.
  
     0.590
RMCT_4491
Hypothetical protein.
  
     0.574
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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