Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1736Putative uncharacterized protein. (80 aa)    
Predicted Functional Partners:
RMCT_1735
Polyketide cyclase / dehydrase and lipid transport.
     
 0.727
DnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
 
  
 0.640
CtpF_2
Metal cation transporter P-type ATPase ctpE.
  
    0.612
EstB_4
Penicillin-binding protein, beta-lactamase class C.
 
     0.612
RMCT_2223
PPE family protein.
 
 
 
 0.595
RMCT_1739
Conserved exported protein of unknown function.
  
    0.546
RMCT_4047
Putative uncharacterized protein.
 
  
 0.545
Cut4
Cutinase Cut4; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.
  
 
 0.485
RMCT_0809
Hypothetical protein.
  
 
 0.485
RMCT_1480
Lipolytic enzyme, G-D-S-L.
  
 
 0.485
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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