STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EstB_4Penicillin-binding protein, beta-lactamase class C. (528 aa)    
Predicted Functional Partners:
CtpF_2
Metal cation transporter P-type ATPase ctpE.
  
  
 0.937
RMCT_1735
Polyketide cyclase / dehydrase and lipid transport.
       0.734
RMCT_1739
Conserved exported protein of unknown function.
       0.635
RMCT_1736
Putative uncharacterized protein.
 
     0.613
FadD_17
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
     
 0.521
FadK_8
AMP-dependent synthetase and ligase.
     
 0.521
PbpD
Penicillin-binding protein.
  
  
 0.514
AccD3
acetyl-CoA carboxylase carboxyl transferase beta subunit accD3.
     
 0.506
YbbD
Beta-glucosidase-like glycosyl hydrolase.
 
  
 0.482
DacB_3
D-alanyl-D-alanine carboxypeptidase dacB2; Belongs to the peptidase S11 family.
     
 0.480
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.