Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RMCT_1739Conserved exported protein of unknown function. (373 aa)    
Predicted Functional Partners:
EchA6
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.796
CtpF_2
Metal cation transporter P-type ATPase ctpE.
       0.735
RMCT_1345
Metallophosphoesterase.
 
    0.669
AccD3
acetyl-CoA carboxylase carboxyl transferase beta subunit accD3.
       0.652
EstB_4
Penicillin-binding protein, beta-lactamase class C.
     
 0.648
RMCT_1741
Amylo-alpha-1,6-glucosidase.
       0.584
PimA_2
Glycosyltransferase.
       0.584
RMCT_2693
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.582
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
 
 0.555
DacB_4
D-alanyl-D-alanine carboxypeptidase.
     
 0.549
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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