STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1741Amylo-alpha-1,6-glucosidase. (711 aa)    
Predicted Functional Partners:
PimA_2
Glycosyltransferase.
 
 
 0.972
GlgA_1
Glycosyltransferase.
 
 
 0.882
RMCT_2185
Glycogen phosphorylase glgP.
  
 
 0.800
EchA6
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.797
GlgA_2
Glycosyltransferase.
 
 
 0.590
RMCT_1739
Conserved exported protein of unknown function.
       0.587
AccD3
acetyl-CoA carboxylase carboxyl transferase beta subunit accD3.
       0.586
Pgm
Phosphoglucomutase.
   
  
 0.586
TreZ
Maltooligosyltrehalose trehalohydrolase treZ.
 
  
 0.580
RMCT_3583
Transferase.
 
 
 0.562
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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