Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RMCT_1745Putative uncharacterized protein. (238 aa)    
Predicted Functional Partners:
RMCT_1744
Membrane protein.
 
     0.950
CydC
Component linked with the assembly of cytochrome' ABC transporter ATP-binding protein CydC.
  
 
 0.860
CydB
Integral membrane cytochrome D ubiquinol oxidase subunit II cydB.
  
  
 0.727
AppC
Integral membrane cytochrome D ubiquinol oxidase subunit I cydA.
  
  
 0.695
RMCT_1747
ABC transporter-like protein.
 
    0.628
RMCT_3469
Hypothetical protein.
  
     0.615
RMCT_1746
ABC transporter.
  
    0.571
RMCT_2699
Multisubunit Na+/H+ antiporter subunit MnhF.
 
     0.563
KdgR_3
Transcriptional regulator.
 
     0.539
KstR_4
TetR family transcriptional regulator.
 
     0.496
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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