STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1776Resuscitation-promoting factor RpfC. (404 aa)    
Predicted Functional Partners:
LytC
Hydrolase.
 
  
 0.513
Crp
Cpr/FNR family transcriptional regulator.
 
   
 0.474
WrbA
Multimeric flavodoxin WrbA.
  
  
 0.471
RMCT_4317
Flavodoxin-like protein.
  
  
 0.471
RMCT_3153
Antibiotic ABC transporter membrane protein.
 
     0.458
RMCT_1107
Putative uncharacterized protein.
  
  
 0.456
RMCT_1665
Integral membrane protein.
  
  
 0.456
Dps
Ferritin, Dps family protein; Belongs to the Dps family.
  
  
 0.455
SodC_2
Copper/zinc binding superoxide dismutase.
   
  
 0.455
SodC_1
Periplasmic superoxide dismutase [Cu-Zn] sodC; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
  
 0.455
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.