STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1789Pyridoxamine 5'-phosphate oxidase-like protein. (141 aa)    
Predicted Functional Partners:
RMCT_1790
Methyltransferase type 12.
       0.818
Fgd_4
Luciferase-like protein.
       0.573
RMCT_1787
Cupin domain-containing protein.
  
    0.561
RMCT_0039
Metallo-beta-lactamase superfamily enzyme.
 
  
 0.546
KdgR_3
Transcriptional regulator.
 
     0.499
RMCT_0279
Type I phosphodiesterase/nucleotide pyrophosphatase.
 
     0.498
RMCT_3568
Phosphoribosylglycinamide formyltransferase protein.
 
     0.450
RMCT_4469
Hypothetical protein.
  
     0.450
RMCT_0608
Nitroreductase.
 
  
 0.438
MdlB
L-lactate dehydrogenase (cytochrome) lldD2.
  
    0.419
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.