STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1799Hypothetical protein. (312 aa)    
Predicted Functional Partners:
RMCT_1800
Transcriptional regulator.
 
   
 0.924
RMCT_0704
Peptidoglycan-binding LysM.
  
     0.615
RMCT_2336
Putative uncharacterized protein.
  
     0.614
RMCT_1804
Acyl-[acyl-carrier-protein] desaturase desA1.
 
     0.596
RMCT_2942
TetR family transcriptional regulator.
 
   
 0.590
RMCT_4075
TetR family transcriptional regulator.
 
   
 0.551
RMCT_0206
Polyketide cyclase/dehydrase and lipid transport.
  
     0.545
RMCT_1735
Polyketide cyclase / dehydrase and lipid transport.
  
     0.541
RMCT_3882
Hypothetical protein.
  
     0.514
Dus
Transcriptional regulator; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.499
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.