WalR protein (Mycolicibacterium thermoresistibile)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Mycolicibacterium thermoresistibile

NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ArlS_2	RMCT_4559	RMCT_1320	RMCT_4559	Histidine kinase.	Stage II sporulation protein E.	0.922
ArlS_2	SenX3	RMCT_1320	RMCT_2634	Histidine kinase.	Two component system sensor histidine kinase senX3.	0.467
ArlS_2	WalR	RMCT_1320	RMCT_1814	Histidine kinase.	Transcriptional regulator.	0.781
PhoR	RMCT_4559	RMCT_2311	RMCT_4559	Two component system sensor transduction histidine kinase mtrB.	Stage II sporulation protein E.	0.910
PhoR	SenX3	RMCT_2311	RMCT_2634	Two component system sensor transduction histidine kinase mtrB.	Two component system sensor histidine kinase senX3.	0.455
PhoR	WalR	RMCT_2311	RMCT_1814	Two component system sensor transduction histidine kinase mtrB.	Transcriptional regulator.	0.749
RMCT_4559	ArlS_2	RMCT_4559	RMCT_1320	Stage II sporulation protein E.	Histidine kinase.	0.922
RMCT_4559	PhoR	RMCT_4559	RMCT_2311	Stage II sporulation protein E.	Two component system sensor transduction histidine kinase mtrB.	0.910
RMCT_4559	SenX3	RMCT_4559	RMCT_2634	Stage II sporulation protein E.	Two component system sensor histidine kinase senX3.	0.919
RMCT_4559	WalR	RMCT_4559	RMCT_1814	Stage II sporulation protein E.	Transcriptional regulator.	0.899
RMCT_4559	pstB	RMCT_4559	RMCT_1809	Stage II sporulation protein E.	Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.611
RMCT_4559	rpoA	RMCT_4559	RMCT_0527	Stage II sporulation protein E.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.533
RMCT_4559	rpoC	RMCT_4559	RMCT_2929	Stage II sporulation protein E.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.733
RMCT_4559	rpoZ	RMCT_4559	RMCT_3654	Stage II sporulation protein E.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.606
RMCT_4559	sigA	RMCT_4559	RMCT_0691	Stage II sporulation protein E.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.795
SenX3	ArlS_2	RMCT_2634	RMCT_1320	Two component system sensor histidine kinase senX3.	Histidine kinase.	0.467
SenX3	PhoR	RMCT_2634	RMCT_2311	Two component system sensor histidine kinase senX3.	Two component system sensor transduction histidine kinase mtrB.	0.455
SenX3	RMCT_4559	RMCT_2634	RMCT_4559	Two component system sensor histidine kinase senX3.	Stage II sporulation protein E.	0.919
SenX3	WalR	RMCT_2634	RMCT_1814	Two component system sensor histidine kinase senX3.	Transcriptional regulator.	0.750
SenX3	pstB	RMCT_2634	RMCT_1809	Two component system sensor histidine kinase senX3.	Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.632

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