STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HsaA_4Oxidoreductase. (409 aa)    
Predicted Functional Partners:
YngG_2
hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.861
HsaC
Biphenyl-2,3-diol-1,2-dioxygenase bphC.
 
  
 0.822
Frc_23
formyl-CoA transferase; Belongs to the CoA-transferase III family.
 
 
  0.815
RMCT_1824
Putative uncharacterized protein.
       0.779
BioH
Alpha/beta hydrolase.
  
   0.765
FcbB2_1
enoyl-CoA hydratase/isomerase.
 
 0.760
FcbB2_3
enoyl-CoA hydratase/carnithine racemase.
 
 0.752
CaiD_11
enoyl-CoA hydratase.
 
 0.751
FcbB2_5
enoyl-CoA hydratase/carnithine racemase.
 
 0.749
FadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 0.745
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.