STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1884Hypothetical protein. (181 aa)    
Predicted Functional Partners:
RMCT_1882
Cytochrome P450 51.
 
    0.986
FabG_28
Short chain dehydrogenase.
 
    0.973
KstR_1
TetR family transcriptional regulator.
 
     0.966
RMCT_1883
Ferredoxin.
 
    0.955
RMCT_1880
Cytochrome P450 123 cyp123.
 
    0.898
RMCT_1874
Hypothetical protein.
 
     0.885
RMCT_1875
Gamma-carboxymuconolactone decarboxylase subunit like protein.
 
    0.877
GarR_3
Dehydrogenase/reductase.
 
    0.839
AldA_5
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
     0.795
RMCT_1245
Tetr family transcriptional regulator.
 
     0.792
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.