Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_19242-nitropropane dioxygenase. (373 aa)    
Predicted Functional Partners:
RMCT_1925
fatty-acid--CoA ligase.
 
  
 0.892
CaiD_10
enoyl-CoA hydratase.
 
  
 0.796
RMCT_1932
Lipid-transfer protein.
 
    0.761
RMCT_1931
DNA-binding protein.
 
     0.732
RMCT_1949
MaoC-like dehydratase.
 
    0.725
KasA_2
Fatty acid synthase.
  
  
 0.705
KstR_3
TetR family transcriptional regulator.
 
  
 0.685
RMCT_1933
Lipid carrier protein or keto acyl-CoA thiolase ltp3.
 
    0.645
RMCT_2370
Acyl dehydratase.
 
    0.645
KstR_2
TetR family transcriptional regulator.
 
  
 0.631
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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