Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CaiD_10 | RMCT_1927 | RMCT_1926 | RMCT_1927 | enoyl-CoA hydratase. | Hypothetical protein. | 0.470 |
GltB | RMCT_1927 | RMCT_1227 | RMCT_1927 | Ferredoxin-dependent glutamate synthase, large subunit gltB. | Hypothetical protein. | 0.504 |
LprN_2 | Mce4A | RMCT_1910 | RMCT_1914 | MCE family lipoprotein LprN. | MCE-family protein mce4A. | 0.952 |
LprN_2 | RMCT_1591 | RMCT_1910 | RMCT_1591 | MCE family lipoprotein LprN. | Virulence factor Mce family protein. | 0.501 |
LprN_2 | RMCT_1927 | RMCT_1910 | RMCT_1927 | MCE family lipoprotein LprN. | Hypothetical protein. | 0.464 |
Mce4A | LprN_2 | RMCT_1914 | RMCT_1910 | MCE-family protein mce4A. | MCE family lipoprotein LprN. | 0.952 |
Mce4A | RMCT_1591 | RMCT_1914 | RMCT_1591 | MCE-family protein mce4A. | Virulence factor Mce family protein. | 0.804 |
Mce4A | RMCT_1927 | RMCT_1914 | RMCT_1927 | MCE-family protein mce4A. | Hypothetical protein. | 0.512 |
RMCT_0003 | RMCT_1927 | RMCT_0003 | RMCT_1927 | Putative uncharacterized protein. | Hypothetical protein. | 0.511 |
RMCT_0404 | RMCT_1927 | RMCT_0404 | RMCT_1927 | Hypothetical protein. | Hypothetical protein. | 0.452 |
RMCT_1591 | LprN_2 | RMCT_1591 | RMCT_1910 | Virulence factor Mce family protein. | MCE family lipoprotein LprN. | 0.501 |
RMCT_1591 | Mce4A | RMCT_1591 | RMCT_1914 | Virulence factor Mce family protein. | MCE-family protein mce4A. | 0.804 |
RMCT_1591 | RMCT_1927 | RMCT_1591 | RMCT_1927 | Virulence factor Mce family protein. | Hypothetical protein. | 0.469 |
RMCT_1927 | CaiD_10 | RMCT_1927 | RMCT_1926 | Hypothetical protein. | enoyl-CoA hydratase. | 0.470 |
RMCT_1927 | GltB | RMCT_1927 | RMCT_1227 | Hypothetical protein. | Ferredoxin-dependent glutamate synthase, large subunit gltB. | 0.504 |
RMCT_1927 | LprN_2 | RMCT_1927 | RMCT_1910 | Hypothetical protein. | MCE family lipoprotein LprN. | 0.464 |
RMCT_1927 | Mce4A | RMCT_1927 | RMCT_1914 | Hypothetical protein. | MCE-family protein mce4A. | 0.512 |
RMCT_1927 | RMCT_0003 | RMCT_1927 | RMCT_0003 | Hypothetical protein. | Putative uncharacterized protein. | 0.511 |
RMCT_1927 | RMCT_0404 | RMCT_1927 | RMCT_0404 | Hypothetical protein. | Hypothetical protein. | 0.452 |
RMCT_1927 | RMCT_1591 | RMCT_1927 | RMCT_1591 | Hypothetical protein. | Virulence factor Mce family protein. | 0.469 |
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