STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1928Cytochrome P450. (400 aa)    
Predicted Functional Partners:
RMCT_1430
Cholesterol dehydrogenase.
  
 0.938
Cyp125
Cytochrome P450.
  
  
0.925
RMCT_0297
Cytochrome P450.
  
  
0.924
RMCT_1872
Cytochrome P450 monooxygenase.
  
  
 
0.918
ChoD_2
Cholesterol oxidase precursor choD.
    
 0.913
ChoD_1
FAD dependent oxidoreductase.
    
 0.909
ChoA
Cholesterol oxidase.
    
 0.908
PpsA_7
Polyketide synthase pks13.
  
 0.903
PpsA_2
Beta-ketoacyl synthase.
  
 0.794
Hmp_6
Hemoglobine-related protein hmp.
  
 0.793
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.