Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1936Hypothetical protein. (153 aa)    
Predicted Functional Partners:
KshA_8
Rieske (2Fe-2S) domain-containing protein.
 
    0.973
RMCT_1931
DNA-binding protein.
 
     0.837
RMCT_1932
Lipid-transfer protein.
 
     0.793
RMCT_1937
Putative uncharacterized protein.
       0.740
KstR_2
TetR family transcriptional regulator.
  
     0.736
HsaC
Biphenyl-2,3-diol-1,2-dioxygenase bphC.
 
     0.734
RMCT_1950
Nucleic acid-binding protein.
  
     0.727
KstR_3
TetR family transcriptional regulator.
  
     0.716
RMCT_0740
Alanine rich transmembrane protein.
  
     0.707
RMCT_1949
MaoC-like dehydratase.
  
     0.695
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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