Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1940Hypothetical protein. (375 aa)    
Predicted Functional Partners:
HdhA_3
Short chain dehydrogenase.
 
  
 0.986
RMCT_1938
Sulfotransferase family protein.
 
    0.972
KshA_8
Rieske (2Fe-2S) domain-containing protein.
 
     0.774
KshA_4
Iron-sulfur binding oxidoreductase.
 
     0.759
BaiE_1
Hypothetical protein.
 
     0.750
BphC
Extradiol dioxygenase, type I.
 
     0.740
KdgR_3
Transcriptional regulator.
 
     0.729
RMCT_3415
Putative uncharacterized protein.
  
     0.691
HsaC
Biphenyl-2,3-diol-1,2-dioxygenase bphC.
 
     0.677
HsaA_5
Oxidoreductase.
 
   
 0.677
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.