STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1949MaoC-like dehydratase. (133 aa)    
Predicted Functional Partners:
RMCT_1950
Nucleic acid-binding protein.
 
 0.999
RMCT_1951
acyl-CoA dehydrogenase fadE29.
 
 0.996
Ltp
Lipid-transfer protein.
 
 
 0.973
CaiA_7
acyl-CoA dehydrogenase fadE28.
 
 0.971
RMCT_2373
Putative uncharacterized protein.
 
 
 0.959
FadA5
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.924
RMCT_2372
Putative uncharacterized protein.
 
 0.912
CaiD_11
enoyl-CoA hydratase.
 
 0.900
FadE26
acyl-CoA dehydrogenase fadE26.
 
 0.897
RMCT_1932
Lipid-transfer protein.
 
 
 0.892
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.