STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddn_3Deazaflavin-dependent nitroreductase family protein. (148 aa)    
Predicted Functional Partners:
Ddn_2
aclJ protein.
 
    
0.808
RMCT_1930
Coenzyme F420-dependent oxidoreductase.
  
     0.762
RMCT_1145
Oxidoreductase.
  
     0.750
Fgd_1
Oxidoreductase.
  
     0.748
CofD
LPPG:FO 2-phospho-L-lactate transferase.
  
     0.746
fgd-2
F420-dependent glucose-6-phosphate dehydrogenase fgd1; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
  
     0.729
fgd
F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
  
     0.726
RMCT_1955
Putative uncharacterized protein.
       0.724
RutA_1
Monooxygenase.
  
     0.714
Fgd1_6
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase.
  
     0.705
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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