STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FabG_29Short chain dehydrogenase. (252 aa)    
Predicted Functional Partners:
CaiD_11
enoyl-CoA hydratase.
 
 0.994
GctB
CoA-transferase subunit beta.
 
 
 0.981
GctA
CoA-transferase subunit alpha.
 
  
 0.977
RMCT_1964
Oxidoreductase.
 
  
 0.965
RMCT_1959
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
0.921
RMCT_2889
acyl-CoA dehydrogenase.
 
 0.876
CaiA_8
acyl-CoA dehydrogenase.
 
 0.832
KasA_2
Fatty acid synthase.
  
 0.782
RMCT_1949
MaoC-like dehydratase.
 
 0.777
RMCT_1598
Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
0.762
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.