Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PdhR_4GntR family transcriptional regulator. (123 aa)    
Predicted Functional Partners:
YvoA
Transcriptional regulator.
 
  
 0.585
PhnF
Transcriptional regulatory protein.
 
  
 0.575
YurK
UbiC transcription regulator-associated domain-containing protein.
 
  
 0.562
AccD3
acetyl-CoA carboxylase carboxyl transferase beta subunit accD3.
  
  
 0.529
Fgd1_4
5,10-methylenetetrahydromethanopterin reductase.
     
 0.503
YfiR
TetR family transcriptional regulator.
 
  
 0.473
YybR
HxlR family transcriptional regulator.
   
  
 0.448
McbR_2
GntR family transcriptional regulator.
 
  
 0.444
RMCT_0422
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
    0.429
MsrR_3
Transcriptional regulator.
  
    0.421
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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