STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LimB_6Monooxygenase. (352 aa)    
Predicted Functional Partners:
RMCT_1979
uracil-DNA glycosylase.
       0.798
LuxA_1
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase.
 
    0.618
RMCT_1980
Integral membrane transport protein.
       0.601
Azo1
NADPH-dependent FMN reductase.
  
 
 0.495
Azr
NADPH-dependent FMN reductase.
  
 
 0.495
YhhW_1
Pirin-related protein; Belongs to the pirin family.
  
  
 0.483
SsuA
Putative uncharacterized protein.
  
  
 0.468
SsuC
Transporter.
  
  
 0.448
RMCT_0681
Integral membrane alanine and leucine rich protein.
  
  
 0.438
ssuB
ABC transporter; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
  
 0.433
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.