STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1980Integral membrane transport protein. (417 aa)    
Predicted Functional Partners:
GerE
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
   
 0.739
RMCT_2969
Major facilitator superfamily transporter.
  
     0.703
RMCT_4030
Isoniazid inductible gene protein iniC.
 
   
 0.692
IniA
Isoniazid inductible gene protein iniA.
  
     0.651
RMCT_1983
Glycolate oxidase FAD-linked subunit.
  
  
 0.629
LimB_6
Monooxygenase.
       0.601
RMCT_1979
uracil-DNA glycosylase.
       0.579
RMCT_2008
Putative uncharacterized protein.
  
     0.556
RMCT_3905
FHA domain-containing protein.
 
     0.553
EccE1
Predicted protein.
  
     0.530
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.