Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IrtBDrug ABC transporter ATP-binding protein. (579 aa)    
Predicted Functional Partners:
IrtA
Drug ABC transporter ATP-binding protein.
 
 
0.999
RMCT_1988
Oxidoreductase.
       0.623
RMCT_0547
Putative uncharacterized protein.
  
  
 0.605
RMCT_0772
lysine-N-oxygenase mbtG.
 
     0.590
RMCT_1992
TetR family transcriptional regulator.
     
 0.571
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
     0.568
RMCT_2646
Protein of unknown function.
 
  
 0.562
CysA_1
Multidrug ABC transporter ATPase.
 
   
 0.556
RMCT_1991
Cytochrome P450 130 cyp130.
       0.527
RMCT_2223
PPE family protein.
 
     0.498
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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