Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1997RecB family nuclease. (1137 aa)    
Predicted Functional Partners:
RMCT_1996
Lipoprotein lprE.
  
  
 0.899
RMCT_1690
Integral membrane protein.
  
    0.723
OatA_4
Acyltransferase 3.
  
    0.671
RMCT_0169
Restriction endonuclease.
  
    0.658
RMCT_4144
Putative cytoplasmic protein.
  
    0.658
OatA_5
Transmembrane acyltransferase.
  
    0.587
RMCT_3758
Transmembrane protein.
 
     0.550
OatA_3
Acyltransferase 3.
 
    0.544
RMCT_1440
Pyridoxamine 5'-phosphate oxidase-like protein.
 
     0.535
OatA_1
Acyltransferase.
 
    0.534
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.