Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2000Transposase, mutator type. (59 aa)    
Predicted Functional Partners:
RMCT_2803
Transposase, mutator type; Required for the transposition of the insertion element.
  
     0.759
RMCT_0167
Transposase, Mutator family protein; Required for the transposition of the insertion element.
  
     0.672
RMCT_2865
Transposase mutator type; Required for the transposition of the insertion element.
  
     0.612
RMCT_2001
Uncharacterized protein.
       0.572
RMCT_1999
Integrase family protein.
     
 0.519
RMCT_3671
ERCC4 domain-containing protein.
  
     0.463
RMCT_2882
IS1096, tnpA protein.
 
   
 0.453
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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