Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2022Putative uncharacterized protein. (208 aa)    
Predicted Functional Partners:
RMCT_2021
Transmembrane protein.
     
 0.883
Pks2
Polyketide synthase pks5.
  
 0.790
PepO
Zinc metalloprotease.
   
 
 0.693
PpsA_2
Beta-ketoacyl synthase.
  
 0.666
RecQ_1
ATP-dependent DNA helicase.
   
 0.650
EspK_1
Putative uncharacterized protein.
  
 0.645
RMCT_1938
Sulfotransferase family protein.
  
 0.645
EspK_3
Putative uncharacterized protein.
  
 0.645
RMCT_2108
TPR repeat-containing protein.
  
 0.645
RMCT_2304
TPR repeat protein.
  
 0.645
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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