Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
YtpALysophospholipase. (279 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase GlpK; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.935
YutF
Phosphatase.
 
  
  0.917
AdhC2
NADP-dependent alcohol dehydrogenase C.
    
  0.902
RMCT_0846
AMP-forming long-chain acyl-CoA synthetase.
    
 0.821
RMCT_3886
long-chain-fatty-acid--CoA ligase FadD15.
    
 0.821
RMCT_2034
Protein of unknown function.
       0.819
FadD_21
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
    
 0.816
FadD_19
AMP-dependent synthetase and ligase.
    
 0.816
MenE_4
acyl-CoA synthetase.
    
 0.816
FadK_11
AMP-dependent synthetase and ligase.
    
 0.816
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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