Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
YhhW_3Pirin domain-containing protein; Belongs to the pirin family. (252 aa)    
Predicted Functional Partners:
XylB_2
Alcohol dehydrogenase.
       0.722
RMCT_2038
Putative uncharacterized protein.
  
    0.507
RMCT_4559
Stage II sporulation protein E.
  
  
 0.477
RMCT_3550
NAD-dependent epimerase/dehydratase.
 
  
 0.475
AfsQ1
Response regulator receiver modulated serine phosphatase.
  
    0.444
mhpB
2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase; Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6- ketononatrienedioate, respectively; Belongs to the LigB/MhpB extradiol dioxygenase family.
 
  
 0.429
RsbU
Putative GAF sensor protein.
  
    0.422
YhhW_2
Pirin-related protein; Belongs to the pirin family.
 
    
0.421
RMCT_1404
NAD dependent epimerase/dehydratase.
  
  
 0.404
Fgd1_4
5,10-methylenetetrahydromethanopterin reductase.
 
  
 0.404
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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