STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BbsG_1acyl-CoA dehydrogenase fadE2. (399 aa)    
Predicted Functional Partners:
RMCT_0029
acyl-CoA dehydrogenase fadE36.
   0.982
FadE36
Putative uncharacterized protein.
   0.982
FadE36_1
acyl-CoA dehydrogenase FadE36_1.
   0.982
RMCT_1026
Aminoglycoside phosphotransferase.
   0.979
RMCT_0924
acetyl-/propionyl-CoA carboxylase beta subunit accD1.
  
 
 0.935
CaiD_2
enoyl-CoA hydratase/carnithine racemase.
 
 0.918
FadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 0.906
RMCT_1476
Acyl CoA dehydrogenase.
     
 
0.900
EchA8_30
enoyl-CoA hydratase.
  
 0.891
EchA8_24
enoyl-CoA hydratase echA9.
  
 0.891
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.