STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PpsC_1Quinone oxidoreductase. (322 aa)    
Predicted Functional Partners:
EryA_2
Polyketide synthetase mbtC; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.942
RMCT_2086
Peroxisomal multifunctional enzyme A; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.916
CalB_1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.777
RMCT_2084
Protein of unknown function.
       0.740
PpsA_2
Beta-ketoacyl synthase.
 
 
 0.675
RMCT_2091
Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
  
 0.636
RMCT_2090
O-methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
  
 0.605
PpsA_3
Beta-ketoacyl synthase.
 
 
 0.587
RMCT_1417
Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.
   
 0.546
PpsA_7
Polyketide synthase pks13.
 
 
 0.541
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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