Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SrpRTetR family transcriptional regulator. (212 aa)    
Predicted Functional Partners:
RMCT_2090
O-methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
 
     0.768
RMCT_2091
Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
 
     0.766
RMCT_2088
Hypothetical protein.
 
    0.698
RMCT_2089
Putative methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
       0.559
RMCT_2093
Transcriptional regulator.
       0.544
PpsC_1
Quinone oxidoreductase.
     
 0.484
YhhW_2
Pirin-related protein; Belongs to the pirin family.
     
 0.463
RMCT_0706
LGFP repeat-containing protein.
  
     0.453
RMCT_1215
Protein of unknown function DUF222/HNH endonuclease.
  
     0.451
CalB_1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.448
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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