STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2116Protein of unknown function. (312 aa)    
Predicted Functional Partners:
RMCT_2115
Thiamin pyrophosphokinase catalytic subunit.
 
  
 0.991
pyrG
CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.707
NudF_1
NTP pyrophosphohydrolase.
       0.707
TlyA
Cytotoxin|haemolysin tlyA.
       0.670
RMCT_2347
Protein of unknown function.
  
    0.665
LppW
Lipoprotein lppW.
 
     0.662
RMCT_3744
NTP pyrophosphohydrolase.
 
     0.657
RMCT_1172
Beta-lactamase.
  
     0.613
RMCT_0371
Von Willebrand factor, type A.
  
     0.596
RMCT_2837
RNA polymerase sigma-70 factor.
  
   
 0.591
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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