Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2142Hypothetical protein. (202 aa)    
Predicted Functional Partners:
RMCT_4265
Protein of unknown function.
  
     0.668
RMCT_1864
Putative uncharacterized protein.
  
     0.567
RipA
NLP/P60 protein.
  
  
 0.512
FabH_1
3-oxoacyl-ACP synthase.
  
    0.484
RMCT_1585
Protein of unknown function.
  
     0.453
RMCT_0699
Hypothetical protein.
  
     0.438
RMCT_2143
Putative uncharacterized protein.
       0.430
atpH
F0F1 ATP synthase subunit delta; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family.
  
    0.415
RMCT_0033
Hypothetical protein.
  
     0.411
YhgF
Transcriptional accessory protein.
       0.400
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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