STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HsdA_4Short-chain type dehydrogenase/reductase. (279 aa)    
Predicted Functional Partners:
KstR2_7
Transcriptional regulator.
 
     0.790
KasA_2
Fatty acid synthase.
  
 0.782
RMCT_2392
Putative uncharacterized protein.
 
 0.648
Oxc
Thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
 
 0.633
FabD
Malonyl CoA-acyl carrier protein transacylase fabD.
 
 
 0.633
PolS_1
Short-chain dehydrogenase/reductase SDR.
 
 
 0.632
RMCT_2385
isovaleryl-CoA dehydrogenase 1.
 
  0.622
BbsG_4
acyl-CoA dehydrogenase.
 
  0.609
RMCT_2417
Short-chain alcohol dehydrogenase.
 
    0.605
AtsA
Arylsulfatase atsA.
  
 
 0.602
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.